Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952175.1_cds_XP_016491953.1_82217
CDS Infomation

[gene=LOC107811518] [db_xref=GeneID:107811518] [protein=protein IQ-DOMAIN 1-like] [protein_id=XP_016491953.1] [location=complement(join(22402..23055,23178..23546,23685..23990,25160..25240))] [gbkey=CDS]
Sequence

ATGGGCAAGAAAGGGAGTAGTTGGTTTTCATCTGTGAAGAAAGTTTTCAAACATTCTCCC
AAGGATTCACCAGAGAAGAAGAAGGAAACATTAGACAGCAAATGGCAACCTGAAGCTCCA
GAAGTTGTGTCACTTGAACATTTTCCAACAGGGAGTTCTCCAGATCTTATTAGCCATGGA
GAGAGTAACGTCGATTCATCGTCTACAGTGGCTGAAGATCATAACCATGCCATTGCTGTT
GCAGTGGCCACGGCTGCAGCCGCTGAGGCAGCTGTTGCAGCTGCTCAAGCGGCTGCTAAA
GTCGTTAGATTAGCTGGTGGCTACGGCCGCGAGTCCACAGAGGAAAGAGCTGCCACGCTT
ATTCAATCATACTACAGGGGATATCTGGCAAGGCGTGCTTTGCGCGCTCTGAAAGGATTG
GTAAGACTGCAAGCACTAGTGAGGGGACATAATGTGCGGAAACAAGCACAGATGACCATG
AGATGCATGCAAGCATTAGTACGTGTTCAGGCCAGAGTACGAGCAAGAAGACTCCAGTTA
GTCCAGGAGAAGCTAGAGAGCAAGCTAGAAGAAGCGCGAAGGCACGCTAATGAACAAAAA
CAACAACACAAGCACACCAGCCCCATTAAAAATTTAGAGACAGAAGGTTGGGATAACAGG
AACCAAAGCATGGACAAGATCCAAGAAAGCAGTAGGAGAAAATATGATGCTGAAATGAAA
AGGGAGAGAGCTCTTTCTTATGCCTTTGCCTATCAGCAAAACCAGCAACAACAACTATTG
CACGTCGATCCACATGGTGAGGACGCCGAGTTCTTTGGCAATGAGCGCGAAAAGTCGCAA
TGGAGTTGGAGTTGGCTCGAGCGTTGGATGGCTTCGCAACCATACCAATACTCAAGACAC
ATTGTGCCAAGGGACAACTCCTATGTGACAATTTCCACCACAAGTGACATGTCTGAGAAG
ACAGTAGAAATGGATCTAGTCACTGGCCCATTGGGCTCAGAGAATGTTAACTCGGCCCGT
CATGCTTTCGACCAAGCTGAAACAAGCCCATATTCAGCCCGGCAACAACGTCAGTCAAGC
TCTGATTCTGTCCCAAGTTACATGGCCCCAACTCAGTCTGCAAAAGCTAAGGTTAGGAGT
CAAGGCTATGTTAAACATCGTAGCCCACCAGCGGCGCAATGGAATACATCAACAAAGAAG
GGAACACACTATGGATTGGGCCTTGAATCGAGCTCAGGAGCAAGTACAACAGCAATCTAT
CAAGTCTCGAGAAGCCCAAGCCCAAAAACTACGACGAATCGTAGTAGTGGATATGCTAAT
AAATGGATGGCAACTTACAGTCCAGAATCAAGTGGCGATGACCGGGCCTCGCCATTAGGA
GTACATGGCAGGAGATACAATTTTAGTTGA

Peptide Sequence

PEP ID

XP_016491953.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana tabacum]
Sequence

MGKKGSSWFSSVKKVFKHSPKDSPEKKKETLDSKWQPEAPEVVSLEHFPTGSSPDLISHG
ESNVDSSSTVAEDHNHAIAVAVATAAAAEAAVAAAQAAAKVVRLAGGYGRESTEERAATL
IQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQL
VQEKLESKLEEARRHANEQKQQHKHTSPIKNLETEGWDNRNQSMDKIQESSRRKYDAEMK
RERALSYAFAYQQNQQQQLLHVDPHGEDAEFFGNEREKSQWSWSWLERWMASQPYQYSRH
IVPRDNSYVTISTTSDMSEKTVEMDLVTGPLGSENVNSARHAFDQAETSPYSARQQRQSS
SDSVPSYMAPTQSAKAKVRSQGYVKHRSPPAAQWNTSTKKGTHYGLGLESSSGASTTAIY
QVSRSPSPKTTTNRSSGYANKWMATYSPESSGDDRASPLGVHGRRYNFS

Transcript Sequence

Gene sequence data has not been registered.